These observations underscore the importance of aB-crystallin in diseases of aging and protein aggregation, but their importance in mouse models has not been examined. To this end, we examined behavioral deficits when AD model mice were crossed mice lacking aB-crystallin/ HspB2. Older knockout mice consistently lost weight and body fat and subsequently developed severe spine curvature and skeletal muscle degeneration. The importance of sHsps in mice experiencing an increased proteotoxic stress was previously not studied. In this report, we inter-crossed between mice lacking aB-crystallin/HspB2 and Tg2576 transgenic mice, which over-produces the highly aggregation-prone amyloid-beta. We observed that chaperonedeficient transgenic mice developed severe locomotion defects compared to mice with either chaperone deficiency alone or transgene expression alone. Our results show that exacerbation of protein aggregation and loss of chaperones produced a new synthetic phenotype of motor defects in mice. In this study, we aimed to investigate the effect of chaperonedeficiency in a mouse model for AD. When expression of APP was combined with loss of aB-crystallin/HspB2, we observed that new phenotypes involving locomotion and sensory function deficits were revealed. Neither loss of aB-crystallin/HspB2 nor transgenic expression of APP by themselves produced these phenotypes. The synthetic sick phenotypes underscore a negative synergy between expression of APP, which is thought to increase the production of the aggregation-prone Ab peptide and reduced chaperone function. When misfolding-prone proteins are overproduced, cellular health may depend on its ability to also overproduce chaperones. In AD brains, where the load of misfolded proteins is high, others have observed that aB-crystallin expression was high in glial cells in areas surrounding plaques and tangles. However, we observed that aB-crystallin levels in brain lysates decreased in an age-dependent manner in transgenic AD model mice compared to non-transgenic littermates. The contrasting observations may be attributed to the differences in methods – while others have monitored relatively small regions by immunohistochemistry in human AD brains, we monitored the expression levels by immunoblotting lysates from the entire brains of a mouse model for AD. In this regard, we would like to point out that other studies have observed no significant differences in the expression of aBcrystallin in various regions of AD brains by immunoblotting methods, by mass spectrometry based protein identification methods and by immunohistochemical methods. Further, we speculate that the difference between the human and mouse results could be due to differential cellular responses towards the entire gamut of Rapamycin pathologies in AD brains versus the predominantly plaque pathology in the AD model mice used in this study. However, the exact reasons for these observations are presently unclear and require further experimentation.
Monthly Archives: May 2020
Glycosylation is the covalent attachment of an oligosaccharide chain to a protein backbone and is considered to be a very common protein modification
The structure and size of the carbohydrate chain can be very diverse and can alter the physicochemical characteristics of a protein. Two major types of glycosylation, referred to as N- and O-linked glycosylation, can be distinguished. N-glycans are attached to Asn residues of the peptide backbone while O-glycans are connected to Ser or Thr residues. Only in recent years, it has been acknowledged that glycosylation of proteins modulates various processes such as subcellular localization, protein quality control, cell-cell recognition and cell-matrix binding events. In turn, these important functions control developmental processes such as embryogenesis or organogenesis. Although the overall importance of glycosylation is recognized nowadays, the different types of glycosylated proteins in an organism are mostly unknown indicating that the full range of biological and cellular functions is still not fully understood. Deciphering the complexities in biosynthesis and function of glycoproteins in multicellular organisms is a major challenge for the coming decade. Insects are without any doubt the largest animal taxon found on Earth accounting for more than half of all known living species. Their unprecedented evolutionary success is the result of an enormous genetic and phenotypic diversification allowing insect species to adapt to a wide variety of ecological niches and environmental challenges. For example, the genetic diversity within one insect order is already much wider than between distant vertebrates such as human and zebrafish, spanning a whole phylum. Because insects are the most diverse organisms in the history of life, they should provide profound insights into diversification of glycobiology in general and differences of glycosylation in particular. To date, almost all information concerning glycobiology in insects was obtained from studies with the fruit fly, Drosophila melanogaster, the best studied insect laboratory model organism. For D. melanogaster, different glycosyltransferases and glycosylhydrolases which are responsible for synthesis and trimming of N-glycans have been reported suggesting the presence of multiple glycan structures on glycoproteins. Moreover, at least 42 discrete N-glycans have been identified recently in D. melanogaster, mostly containing oligomannose and core fucosylated paucimannosidic N-glycans. Considering the broad diversity among insect species, it can be expected that the diversification in glycan patterns will even be more extensive when analyzing glycosylation patterns in different insect species. In this study, the functional diversity of glycoproteins was studied for insect species belonging to five important insect orders. We SCH772984 selected four insects with a complete metamorphosis, the flour beetle Tribolium castaneum, the silkworm Bombyx mori, the honeybee Apis mellifera and the fruit fly D. melanogaster, as well as one insect species with an incomplete metamorphosis.
Current effort in described the detectable protein distribution for different strains in similar culture conditions
New advances in MS XL880 technologies afford even greater depth of coverage than reported in the earlier study. By combining knowledge of the proteome adaptation triggered by variation of principle environmental signals with existing transcriptome data, we obtained a more complete understanding of the changes occurring within B. burgdorferi as it responds to these environmental cues. This information provides us with important insight into potential candidate proteins which are changed as the organism prepares to infect the next host. Dendritic cells are specialized antigen presenting cells which constantly screen the environment for foreign particles and engulf them via a variety of ways like phagocytosis, macropinocytosis, caveolin-mediated or clathrin-dependent endocytosis. DCs function at the dividing line of innate and adaptive immunity and regulate the T cell response. DCs capture antigens in the peripheral tissues and present the processed antigen via the major histocompatibility complex I and II receptors. Salmonella in its turn is a very successful pathogen. It is a facultative intracellular pathogen and resides in macrophages and DCs by virtue of its pathogenicity island encoded virulence factors which are required for intracellular survival, replication and for the efficient colonization of deeper tissues. Salmonella is capable of causing symptoms ranging from self limiting diarrhea and localized gastrointestinal inflammation to the systemic typhoid fever. The mice model of infection mimics the pathogenesis of human typhoid fever. Toll like receptors are germ line receptors expressed on DCs and recognize infectious agents through the various moieties present on them and act as a bridge between innate and adaptive immunity. Their localization is determined by the nature of the ligand that they bind to. For instance, Toll like receptor-9 is localized in the late endosomes or lysosomes, where it detects unmethylated CpG motifs in double stranded DNA. Ligand receptor engagement leads to the docking of adaptor molecules like MyD88 to TLRs and recruitment of proteins belonging to the IRAK family. This ultimately leads to the NFkb activation and gene expression for the production of inflammatory cytokines like IL-6, IL-12 and TNF-a which lead to further recruitment of successive waves of immature DCs and monocytes to the portals of pathogen entry. Therefore, TLR activation helps in mounting a more prominent T cell response, better killing of the pathogen and thus utilizing TLR signaling could be an effective strategy to clear the invading pathogen. The same has been shown in cultured hepatocytes where CpG treatment led to an increased TLR-9 expression.
comparison with reference spectra as recently described for the identification and classification of anscriptomic approach
Mass spectrometry is a key tool in cell proteomics. This technique, based on mass determination, is currently used to identify proteins, their amino-acid sequences and their posttranslational modifications. This method can also be used for the identification and sequencing of DNA, RNA and sugars. MALDI-TOF MS is used to identify unknown protein or peptide sequences in fractionated cells. Coupled with twodimensional gels, MALDI-TOF MS can be used to create proteomic maps of cell types such as macrophages and of intracellular compartments. MALDI-TOF MS has been recently introduced into microbiology laboratories to identify and classify bacterial species using intact bacteria. In 2008 a large number of bacterial species present in clinical specimens were identified using databases established from isolated species. In 2006, MALDI-TOF MS has been applied to mammalian cells from three cell lines after lysis in 2,5dihydroxybenzoic acid matrix solution. In these conditions, it has been possible to discriminate the different mammalian lines. Recently, MALDI-TOF MS has been applied to eukaryotic cell lines to provide rapid characterization of cultured cells. However, the method used to analyze these cultured cells involved two steps of ethanol inactivation and formic acid/acetonitrile extraction. To our knowledge, MALDI-TOF MS has not yet been directly applied to intact eukaryotic cells. Our objective was to determine whether intact immune cells exhibited reproducible and specific signatures in MALDI-TOF MS. We found that this approach was useful for discriminating between immune cells. For example, circulating T lymphocytes, monocytes and PMNs as well as monocyte-derived macrophages and DCs all exhibited distinct spectra. We describe the first elements of a database that will be useful for studying cell subsets in tissues and possibly their activation state. Baselines were automatically subtracted from spectra, and the background noise was smoothed during acquisition through the FlexControl software. This reference was validated by other samples from the same cell type. The Biotyper software realigns acquired BIBW2992 spectra from each cell type and automatically creates an average spectrum using default Biotyper software settings provided by the manufacturer. These settings were the same than those used in routine bacteriology. Briefly, the sensitivity or the maximum tolerated error on the values of mass spectra and spectrum shift was 8000 particles per million. The minimum frequency to benchmark selection of peaks was 25%, and only peaks with a signal/noise intensity above background were selected by the software. The cell-type reference consisting of 70 peaks was added to the database.
Down resulted in significantly reduced neuronal differentiation while the overexpression of Cx36 increased neurogenesis
Furthermore, BrdU and Tunel experiments showed that the results were not a reflection of increased neuroblast proliferation prior to differentiation or differential apoptosis respectively as there were no differences between any of the experimental groups. The increased expression of Cx36 during development may provide enhanced cell-cell contact between neuronal progenitors and hence promote neuronal differentiation. A possibility supported by the dependence on Cx36 GJIC for neuronal coupling. Interestingly, the knockdown of Cx36 resulted in a decrease in the number of neurons and an increase in the number of GFAPpositive cells, which could suggest the decrease in neuronal differentiation, elicits a compensatory rise in astrocyte differentiation. The effects of Cx36 manipulation on neurogenesis were only observed in cells that had been expanded for 7 days or less suggesting that the cells have already become committed and no longer respond to Cx36 over expression or knock down. This suggestion fits with the observed decrease in endogenous Cx36 expression that occurs in NPCs after 14–21 days and with Cx36 transduction of 7 day old cultures having no effect on neuronal differentiation. To explore further the involvement of Cx36dependent gap junction communication in intra-neuronal communication and development experiments reflecting the in vivo composition of cells could be undertaken. This could be achieved using conditional Cx-36 transgenic mice and/or the stereotactic injection of viruses. Significantly following the lentiviral mediated overexpression of Cx36 in the intact hippocampus CA3 region of adult rats increased gamma oscillatory activity was measured. Results which further support Cx36 playing a significant physiological role in intra-neuronal gap junction communication in intact networks. In addition to the increase in the number of neurons following Cx36 over expression, we found the number of oligodendrocytes was also significantly increased. Oligodendrocytes are the myelinating cells of the CNS and act to insulate neuronal axons transmitting electrical impulses. It is also known that oligodendrocytes provide trophic factors that promote neuronal survival and hence there may be a cooperative SCH772984 relationship between neurons and oligodendrocytes during the differentiation process. The rise in oligodendrocytes observed may hence be due increased need for myelination and trophic factor support. Studies on transgenic mice lacking both Olig genes revealed that differentiation of motorneurons and oligodendrocytes was replaced with differentiation of interneurons and astrocytes. It may also be the case that an increase in the number of neurons provides a more supportive environment for the differentiation of oligodendrocytes and may explain.