Monthly Archives: July 2019

Approaches such as the synthesis of structural analogues experimental and virtual screening of chemo-libraries

The BIBW2992 natural QSIs contribute to host defense against bacteria and both natural and synthetic QSIs have been proposed as promising molecules because they may act synergistically with antibiotics to limit bacterial infection. This article reports the identification of novel QSIs such as the natural plant compound hordenine and the synthetic indoline-2carboxamides, and also demonstrates the QSI-activity of the three human sexual hormones that are estrone, estriol and estradiol. QSIs have been identified in many organisms, plants being the most frequently investigated source of QSI compounds and algae the providers of the most potent ones. Our results revealed the QSI potentiality of alkaloids such as hordenine,1248, and 3492. Hordenin is a natural alkaloid of the phenethylamine class exhibiting a widespread occurrence in plants, including those that are used for human and animal consumption. Following injection, hordenine stimulates the release of norepinephrine in mammals hence acting indirectly as an adrenergic drug. In the literature, alkaloid compounds have been less frequently reported as acting as QSI than aromatic or polyaromatic compounds. Indeed, solenopsin A, a venom alkaloid produced by the fire ant Solenopsis invicta, has been shown to inhibit BYL719 1217486-61-7 biofilm formation, pyocyanin and elastase production as well as the expression of QS-regulated genes lasB, rhlI and lasI in P. aeruginosa. Peters and co-workers also demonstrated that brominated tryptamine-based alkaloids from Flustrafoliacea,a sea bryozoan, inhibit AHL-regulated gene expression using biosensors P. putida, P. putida and E. coli lasR, cepR and luxR coupled to the promoter of lasB, cepI and luxI, respectively. In this study, the QSI activity of human hormones was supported by complementary features. The pure hormones, especially estriol and estrone, affected expression of the QSregulated reporter fusion traG-lacZ and QS-dependent horizontal transfer of the virulence Ti-plasmid in A. tumefaciens. They also decreased the expression of six QS-regulated genes lasI, lasR, lasB, rhlI, rhlR, and rhlA in P. aeruginosa, but none decreased expression of the QS-independent gene aceA. Because of the effect on lasI and rhlI, the AHL concentration was also affected in the presence of the sexual hormones. In agreement with a previous report comparing the effect of steroid hormones on the growth of several pathogens, they did not affect the growth of A. tumefaciens and P. aeruginosa at the concentrations used for describing QSI activity. The sexual hormones act as QSIs at a mM-range concentration which is similar to that of the natural polycyclic QSIs such as catechin and naringenin, but higher than that of some other natural and synthetic QSIs which act at a mM range or lower. Our work also revealed that pure hormones affected the QS-regulated reporter gene of P. aeruginosa when RhlR or LasR was expressed in E. coli in the presence of the appropriate AHL. Moreover, molecular modeling confirmed the competitive hormone-binding capacity of the two AHL-sensors LasR and TraR, suggesting that the AHL-LuxR sensors are targets of the discovered QSIs. This mechanism of action is frequently encountered among QSIs. Such a putative cross-talk between QS and hormonal signalling was hypothesized in prospective reviews by Rumbaugh and Hughes and Sperandio and in a paper reporting docking-type screening of QSIs, but, to our knowledge, was never experimentally observed in vitro until this report. Finally, the hypothesis rose about QSI-activity of sexual hormones in vivo because the opportunistic pathogen P. aeruginosa is detectable in several tissues and organs of hospitalized patients and healthy women, and can thus come into contact with sexual hormones. A major argument against this hypothesis is that QSI activity of hormones was observed at 2 mM while, in serum, concentrations of hormones such as estradiol reach up to 0.4�C1.6 nM in healthy women and 2�C18 nM during fertilizing protocols. However, the debate remains still unclosed because clinical and environmental Pseudomonas isolates are known for their capacity to import, bind and biodegrade human hormones, including estrogens, via proteins and pathways that are still poorly-characterized. These hormone-modifying capabilities would contribute to underestimate the QSI-efficiency of hormones in our in vitro assay. Adenosine triphosphate has long been recognized for its role in intracellular energy metabolism.

Since molecular mechanisms underlying this process are poorly understood evaluated early cardio-metabolic changes

These results suggest that for 3 months at both standard and accelerated environmental conditions, the formulated IQP-0410 transdermal films are stable products. The human immunodeficiency virus has infected over 40 million individuals over the last decade, with more than 5 million residing in sub-Saharan Africa. Although highly active antiretroviral therapy enhances life expectancy and quality of infected individuals, there is increased emphasis on HAART-mediated metabolic derangements and its potential risk for cardiovascular diseases in the longterm. Protease inhibitors form an integral part of HAART and side-effects include development of dyslipidemia, i.e. greater production of plasma triglycerides and lipids together with an adverse cholesterol profile. Together such derangements elicit inflammation, stress the myocardium, and may potentially predict the onset of insulin resistance and cardiac dysfunction. PIs are also linked to increased risk for myocardial infarction and cardiovascular abnormalities, with many changes resembling coronary artery disease. It is unclear whether metabolic side effects of PIs are independently and/or causally linked with cardiovascular perturbations. Moreover, the effects of PIs per se on the heart in this context are also poorly understood. Therefore, an emerging focus is to identify key metabolic and transcriptional pathways that may mediate NSC 136476 company PI-induced cardio-metabolic pathophysiology. For example, we recently found that rats exposed to 8 weeks of PI treatment displayed cardiac dysfunction. Moreover, PI-treated HIVinfected individuals exhibit elevated reactive oxygen species production that may trigger the activation of detrimental signaling and cell death pathways. HIV-PIs may also exert unfavorable effects at the gene transcriptional level, e.g. activating sterol regulatory element binding protein, a key lipid transcriptional modulator expressed in major metabolic tissues. Upon activation, SREBP binds to sterol-regulatory-element containing promoter sequences in lipogenic and cholesterogenic genes that ultimately results in the production of cholesterol and sterol components. The ubiquitin-proteasome system �C responsible for removal of misfolded or damaged proteins �C is also implicated in the onset of such metabolic side effects. For example, the PI Ritonavir attenuates chymotrypsin- and trypsin-like activities of the 20S UPS subunit in hepatocytes. As a result, Nilotinib degradation of apolipoprotein B was diminished thus providing a potential mechanism for PI-induced hyperlipidemia. Furthermore, SREBPs are ubiquitinated and degraded by the UPS raising the possibility that an inhibition of this system may also contribute to development of dyslipidemia in HIV-infected individuals treated with PIs. Together this may establish a pro-atherogenic profile and increase the risk for the onset of CVD. Despite such progress, the underlying molecular mechanisms responsible for HAART-induced cardio-metabolic side effects are poorly understood, and little is known about the earliest events driving this process. Whether these molecular alterations occur as a direct result of PI treatment or through the activation of additional pathways throughout the body at a later stage remain elusive. For the current study, we therefore hypothesized that PI treatment enhances myocardial oxidative stress and concomitantly inhibits the UPS, having a knock-on effect on important downstream regulators such as gap junctions and ion channels essential in cardiac physiology. We also evaluated several nonoxidative glucose metabolic circuits i.e. the polyol pathway, hexosamine biosynthetic pathway, advanced glycation end products, and PKC activation since previous work found its activation can elicit the onset of cardio-metabolic complications. Since our previous ex vivo rat heart study implicated altered calcium homeostasis in PI-mediated cardiac dysfunction, we further investigated calcium signaling and mitochondrial energetic regulators in an established rat model of chronic PI drug delivery. These data may explain and suggest an association between molecular changes and depressed cardiac contractile function. Although HAART markedly improves the quality of life and prognosis of HIV-infected individuals, it also elicits cardiometabolic side effects in the long-term.

It is tempting to speculate that the granular structures that were observed in TA-treated sporulating yeastare undigested autophagosomes

We applied these CX-4945 PKC inhibitor assays to measure sporulation efficiency in response to treatment with 446 drugs that have been tested in human clinical trials for a wide variety of therapeutic indications. Out of these, 12 were identified that inhibited meiotic development, but not vegetative growth. Strikingly, these sporulation-specific inhibitors were structurally related to a class of compounds called cationic amphiphilic drugs, or CADs. Members of this class are weak bases with lipophilic properties, and tend to accumulate in acidic intracellular compartments such as lysosomes. Once inside the acidic milieu of the lysosome, the molecules NVP-BEZ235 PI3K inhibitor becomeprotonated, can no longer permeate the membrane and get trapped inside the organelle, a phenomenon referred to as lysosomotropism. Ultimately, the excess accumulation of CADs can give rise to a lysosomal storage disorder, called phospholipidosis. Hallmarks of phospholipidosis are the formation of multilamellar vesicles that can lead to the disruption of organelle integrity and an alteration of phospholipid metabolism. Recent work demonstrated that the antidepressant CAD sertraline evokes phenotypes in yeast that resemble those of phospholipidosis. Cationic amphiphiles have also been shown to interfere with the process of autophagy. During autophagy, cytoplasmic cargo is captured into autophagosomes, a double membraned vesicle, followed by fusion of the autophagosome with the lysosome/vacuole to form an autolysosome where the captured material is degraded. The antimalarial drug chloroquine, a CAD, has been shown to accumulate inside autophagic vacuoles and to increase the intralysosomal pH. This inhibits the acid-dependent degradation of autophagosome content and results in the accumulation of autophagic vesicles that cannot be cleared from the cytoplasm. Similarly, yeast cells treated with sertraline, appeared to contain large inclusions of incompletely digested autophagosomes and vacuoles exhibiting increased electron-transparency, suggesting a loss of vacuole acidity and/or impaired delivery of vacuolar hydrolases. In yeast the limitation for any of the essential nutrients can trigger autophagy, with nitrogen limitation displaying the strongest stimulus. In the absence of external nitrogen sources, yeast defective in autophagy experience a strong depletion of internal amino acids, which precludes the synthesis of proteins important for surviving nitrogen starvation and can result in accelerated cell death. Autophagy therefore provides the primary source of nitrogen under starvation condition. This is presumably also the case during sporulation, a process that is induced in yeast when external nutrients are lacking. Indeed, several studies have demonstrated that autophagy is essential to sporulating cells. Several observations made in the present study support a model in which TA could inhibit sporulation by interfering with autophagy. First, the chemical-genomic screen with the homozygous deletion collection identified autophagy-related mutants as hypersensitive to TA. Interestingly, some of the genes that were identified in this screen are involved in autophagosome formation, such as ATG2, ATG9, orATG18. A possible interpretation of our screening data is therefore, that a non-essential pathway that functions in parallel to autophagosome formation, for example its fusion with the lysosome, is affected by TA. Second, transcription of genes involved in amino acid metabolism and transport were found to be up-regulated in the presence of the drug, suggesting that the cells are experiencing a lack of internal amino acids.

The combination synergistically increases p21cip1 expression and histone acetylation in vitro and in vivo

Vel has achieved significant clinical GSK1120212 benefit for multiple myeloma in clinical trials, but its effectiveness and administration have been limited by toxic side effect and development of resistance. Therefore, there is still a need to search for novel combination strategies to increase its effectiveness and decrease its toxic effects. Proteasome inhibition-based Regorafenib combinations have been paid much attention to produce greater clinical activity. Among the candidates identified in preclinical studies, combinations of proteasome inhibitors and HDAC inhibitors appear to be the most potent to produce synergistic cytotoxicity in preclinical MM models and in many other human solid and hematologic cancer cell lines and xenografts. Combination therapy with Vel plus vorinostatin refractory MM have also been initiated in two phase I clinical trials. Although the combination of proteasome inhibitor and HDAC inhibitor has a great potential to be developed as anti-cancer therapy, the involved molecular mechanism is far from being understood. In living cells, L-carnitine, a biologically active form of carnitine, is required for the transport of fatty acids from the cytosol into the mitochondria to breakdown fatty acids for ATP generation. Without LC, it would be impossible to burn the amount of fat necessary to produce the energy. Because of its role as a regulator in the fat-burning process, LC plays an important role in regulating weight and increasing energy levels. Therefore LC has been widely used as a “keep fit” health supplement. It is also known that cancer cells predominantly produce energy by a high rate of glycolysis. We have recently reported that LC is a HDAC inhibitor, which selectively inhibits cancer cell growth in vivo and in vitro. In the current study, we investigated the synergistic effects of HDAC inhibitor LC and proteasome inhibitor Vel on cancer cell growth in vitro and in vivo, and explored the mechanism responsible for the combination-mediated cytotoxicity in cancer cells. Our findings confirmed that proteasome inhibitor and LC synergistically exert anti-cancer activity in vitro and in vivo, implying a great potential in future anti-cancer therapeutics. Our study also suggests a novel mechanism for the crosstalk between proteasome inhibition and LC-mediated protein acetylation. Combination therapy of proteasome inhibitor and HDAC inhibitor has been confirmed to be promising in cancer therapeutics. In the current study, we report that LC and Vel combination efficiently exerts anti-tumor effect both in vitro and in vivo. This has been confirmed by the following results. The combinationdecreased cell viability both in hetaptic HepG2 and SMMC-7721 cancer cells;induced cancer cell death in vitro detected by flow cytometry, morphological observation and PARP cleavage;inhibited tumor growth in vivo. Two models for the mechanism of enhancing cytotoxicity by HDAC inhibitors and proteasome inhibitors have been recently proposed. One model is that HDAC inhibitors promote proteasome inhibition-induced proteotoxic stress. By blocking the proteasome, proteasome inhibitors enhance the accumulation of damaged and misfolded proteins, thus inducing downstream free radical accumulation, ER stress and caspase activation; the second is that proteasome inhibitors enhance HDAC inhibition. In this model, HDAC inhibitors serves as the primary cytotoxic stimulus, perhaps by promoting expression of “death genes” via histone acetylation. Based on our findings, two pathways for the crosstalk between HDAC inhibition and proteasome inhibition have been proposed in this study.

The potential of this chemophore to generate reactive oxygen species and to intercalate in DNA

Compounds with longchain aliphatic acidscould potentially disrupt the Mtb membrane, allowing for entry of protons into the intracellular space, even though they had no such effect in the counter-screens. Compounds 12F10 and 12H5 contain reactive aldehyde moieties that are likely to allow them to bind to diverse proteins as well as DNA; additionally, 12H5 caused more than a 1.5-fold increase in fluorescence quench rate. Supplies of compound 17D7 were insufficient to support more detailed studies. Efforts to synthesize 17D7 in-house were Y-27632 dihydrochloride unsuccessful at producing the final product, but generated the closely related compound 1048, in which a phenolic hydroxyl replaces the methoxy in 17D7. Compound 1048 was 2- to 4-fold more potent than 17D7 in the pHIB assayand was used in subsequent studies. A summary of the selection process is depicted in figure 2D. This work describes a novel whole-cell assay suitable for a HTS format that allows identification of small molecules that perturb pHIB homeostasis. Compared to other whole-cell screening assays for Mtb, which have incubation periods of several days or weeks, the pHIB homeostasis assay is rapid, with results in as little as 4 hours, although we conducted our initial screen at two days. We have adapted this assay to a 384-well format and helped distribute it to another screening center in order to identify additional tool compounds and, potentially, precursors of lead compounds for the treatment of tuberculosis. Secondary screens eliminated compounds with protonophoric and membrane-perturbing properties. Although we developed the assay to identify inhibitors of pHIB homeostasis, the assay may also identify compounds with other activities against Mtb. For example, agrimophol disrupted Mtb��s pH homeostasis and killed Mtb in CHIR-99021 acidic conditions, but it also killed Mtb near neutrality in replicating conditions. Moreover, the assay may identify compounds that kill Mtb whose replication is halted not only by physiologic levels of acid but by other hostimposed stresses as well. Non-replicating subpopulations of Mtb are phenotypically relatively resistant to most standard chemotherapeutics used to treat tuberculosis. To our knowledge, this is the first report of an assay for compounds that disrupt intrabacterial pH homeostasis. This may also be the first report of PZA��s effects on pHIB in Mtb. PZA is a clinically important but paradoxical and unconventional drug. Despite its remarkable sterilizing activity in vivo, it is inactive against Mtb under standard culture conditionsbut weakly active against Mtb exposed to an acidic pH, conditions under which Mtb replicates little. Fatty acid synthase-I has been proposed as a target for PZA, but while 5-Clpyrazinamide targets this protein, PZA does not. Recent studies point to RpsA and trans-translation as a target of pyrazinoic acid. It has also been proposed that POA does not have a specific cellular target but simply functions to shuttle protons from the extracellular space into the intrabacterial space, resulting in decreased pHIB, collapse of membrane potential, and bacterial death. Our results provide direct evidence that PZA lowers Mtb��s pHIB in an acidic environment. This assay may select for compounds with similar sterilizing abilities as PZA, an important goal, as resistance to PZA is increasing. We chose to screen a natural product library because of natural products�� structural diversity and greater propensity for antiinfective activity than seen with compounds produced by conventional combinatorial chemistry. A particular challenge in the chemical biology of Mtb is its thick cell wall comprised largely of mycolic acids and their esters.