A greater diversity within these factors could perhaps be achieved under greenhouse conditions. In SDS under controlled conditions, increasing spore numbers of F. virguliforme used for inoculations caused increasingly more severe root necrosis. The need for field experiments to elucidate the interaction of a plant-parasitic nematode and a fungal disease as claimed by Evans and Haydock along with difficulties of inducing consistent foliar SDS symptoms on adult plants under greenhouse conditions made it paramount to use data as generated in the current study and modeling approach. These experimental plots had been infested a year prior to these data collections, and allowed for some natural fungal and nematode reproduction in that year along with some microbial community development in the soils, making infestations somewhat natural and not freshly added from artificial amendments. No record of the form F. virguliforme in soil was available but presumably the fungus survived as chlamydospores. The standardization of the qPCR assay was done with fungal macroconidia added to test soil. Thus the DNA amounts predicted an equivalent to a distinct number of macroconidia. In Fusarium, different spore types have different inoculum potential,, which added uncertainty to the current evaluations. DNA extractions were done from soybean tap roots since their infection is considered critical in overall SDS development and foliar symptom expression. Strong correlations between disease and the amount of DNA in roots were found. Surprisingly, very high amounts of the fungus in soil at planting resulted in limited SDS disease development in this study. On the contrary, low quantities of the fungus were sufficient to cause severe disease if the nematode was present at high population densities. This emphasized the critical role of H. glycines in SDS development under the environmental and edaphic conditions of the present study. A similar observation was made in studies of early dying of potato where frequencies of the pathogens involved in a disease complex were reported; it appeared that low fungal population densities were effective in causing the disease complex in the presence of the nematode. This supported our hypothesis for the need of concomitant quantitative detection of both pathogens for forecasting SDS disease severity and its influence on yield. The assay was also found to be specific when tested against ten other genera of fungi and Oomycetes that are common pathogens of soybean or are common in soils and plants in corn-soybean rotations in the Midwestern U.S.A.. Thus, this primer set was robust for DNA evaluations under field conditions, something previously published assays did not allow to the same extent. This new qPCR assay is more specific for Fv than were similar assays that were available when this work was conducted.
Provides another tool with much value for specific and sensitive detection of studies of the biology of pathogen
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